Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866602:139866646:[+] chr3:33472314:33472360:[-] nonBSJ supported Intron

circRNA 5':AUGUCUUCCUAUAUCUCCAGGUCUUCCAGCAUCUC------CAGG-GCUUCC 3'


            || |:|||| :|||||: :|||||||| :|| ||: :||||


target  3': ACCGGAGGA---GGAGGUUGGGAAGGUCGAGGAAACGUUAGUUUAUGAAG 5'

 -39.90 4 KARR-seq