Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866531:139866587:[+] chr22:25779142:25779199:[-] nonBSJ supported Intron

circRNA 5': UGUCUUCCAGAAAA---UCCAC-GUCUUCC-AGAAAAUAUAUGUCUUCCAA----CUAAGCUACGU 3'


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target  3':GAC-GAAGGUCAGAGCCGAGUUUUCAGU-GGUUCUC-------CGUAAGGGCCGUGGACUCGAGGCU 5'

 -23.50 2 KARR-seq
chrX:139866570:139866587:[+] chr22:25779109:25779127:[-] nonBSJ supported Intron

circRNA 5':CUUCCAACUAAGCUACGU 3'


            |:|| |||:||:|


target  3':AAGGGGUCUAUCGGUGUAC 5'

 -13.50 1 KARR-seq