Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139865789:139865813:[+]	chr21:40771994:40772038:[+]	nonBSJ supported	Intron	circRNA 5': UUCCA-GUCA-----------AUCAGU--GUCU-----UCCAGA 3' \|:\|\|\| \|\|\|\| \|:\|\|\|\| \|:\|\| \|\|\|\|\| target 3':GGGGGUCCAGUCCCCUGUCAUUUGGUCAAACGGAUCGUAAGGUCG 5'	-20.90	1	KARR-seq
chrX:139865784:139865813:[+]	chr21:40771994:40772043:[+]	nonBSJ supported	Intron	circRNA 5': AGGUCUUCCA-GUCA-----------AUCAGU--GUCU-----UCCAGA 3' \|\| :\|::\|\|\| \|\|\|\| \|:\|\|\|\| \|:\|\| \|\|\|\|\| target 3':CUCGGGGGGGUCCAGUCCCCUGUCAUUUGGUCAAACGGAUCGUAAGGUCG 5'	-27.30	1	KARR-seq