Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139866154:139866174:[+]	chr20:43398206:43398231:[-]	nonBSJ supported	Intron	circRNA 5':GUCUUCCAGAAAAU----CCUUGUC 3' \|\|:\|\|\|\|: \|\|\|\|\|:\| target 3':AAGGAGGUUCAAGACGACGGAACGGU 5'	-16.10	3	KARR-seq
chrX:139866280:139866300:[+]	chr20:43398207:43398231:[-]	nonBSJ supported	Intron	circRNA 5':GUCUUCCAGAAAAU----CCUUGUC 3' \|\|:\|\|\|\|: \|\|\|\|\|:\| target 3': AGGAGGUUCAAGACGACGGAACGGU 5'	-15.50	1	KARR-seq
chrX:139866280:139866300:[+]	chr20:43398206:43398231:[-]	nonBSJ supported	Intron	circRNA 5':GUCUUCCAGAAAAU----CCUUGUC 3' \|\|:\|\|\|\|: \|\|\|\|\|:\| target 3':AAGGAGGUUCAAGACGACGGAACGGU 5'	-16.10	2	KARR-seq