Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139865375:139865429:[+]	chr20:35488046:35488107:[-]	nonBSJ supported	5UTR	circRNA 5':AACUCCGG-GUCUUCCA-GC--GACU-----UCA-AGUCUUCCAAUAAUCUCAAGGUCUUCCAGA 3' \|\|:\|\|:\| \|: \|\|\| :\| \|\|\|\| \|\|\| \|\|\|\|:\| :\|\| \|:\|\|\|\| target 3':CUGGGGUCUCGUCUGGUAUGGUCUGACCUCUAGUGUCAGGAAGCGUCAACUG--UCA-AGGGUCA 5'	-30.90	1	KARR-seq
chrX:139865376:139865429:[+]	chr20:35488046:35488107:[-]	nonBSJ supported	5UTR	circRNA 5': ACUCCGG-GUCUUCCA-GC--GACU-----UCA-AGUCUUCCAAUAAUCUCAAGGUCUUCCAGA 3' \|\|:\|\|:\| \|: \|\|\| :\| \|\|\|\| \|\|\| \|\|\|\|:\| :\|\| \|:\|\|\|\| target 3':CUGGGGUCUCGUCUGGUAUGGUCUGACCUCUAGUGUCAGGAAGCGUCAACUG--UCA-AGGGUCA 5'	-30.30	1	KARR-seq