Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139866303:139866355:[+]	chr2:240852280:240852328:[-]	nonBSJ supported	Intron	circRNA 5':CCCUCAAAUCCAUAGCUUCCGAAAAAUCCA-GGUCUUCCAGGAAAUCCGUGUCU 3' \|\|\|\|\|\| \|\|\|\| :\|:\|\|\| \|\|\| \|:\|\|\|\|\|\| \|\| :\|\|\| \|\|\|\| target 3':CGGAGUUGAGGUC-UGGAGGAAC---AGGGACUAGAAGG--CUAAGGGCUCAGAA 5'	-45.20	4	KARR-seq

Variants map to interaction

Interaction region	CircRNA/target	Mutation ID	Position	Variant	Associated trait	Resource
chrX:139866303:139866355:[+]	circRNA	-	chrX:139866318-139866319	C>T	BTCA-JP	ICGC