Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139865775:139865847:[+]	chr2:128016762:128016809:[-]	nonBSJ supported	Intron	circRNA 5': AAGAAAUCCA---GGUCUUCCAGUCAAUCAGUGUCUUCCAGAAAGAAAUCCAGGUCUUCCAGUCA-GUCAGUGUCUU 3' \|\|:\|\|\|\|\|\| \|\|:\|: \|\|\|\|\|\|\|: \|\| \|\|\| \|\|\|\|\|\| target 3':UUUUUUUAGGGUACCCGGG-----------------------------UAGGUCCGUCCUGAU-GUACAGACACAGAC 5'	-33.90	2	KARR-seq

Variants map to interaction

Interaction region	CircRNA/target	Mutation ID	Position	Variant	Associated trait	Resource
chr2:128016762:128016809:[-]	target	-	chr2:128016796-128016797	C>T	BTCA-JP	ICGC