5'UTR
CDS
3'UTR
Exon
circRNA binding site
| CircRNA interaction region | Target interaction region | Interaction type | Target element | RNA duplex | MFE (kcal/mol) | Reads | Methods |
| chrX:139865783:139865824:[+] | chr2:112973740:112973787:[-] | nonBSJ supported | 3UTR |
circRNA 5':CAGGUCUUCCAGUCAAUCAGUG------UCUUCCAGAAAGAAAUC-CAG 3' ||| ||||:|||||||| ||| ||: ||| || target 3':UUCCUUUAGGUUAGUUAGUCUUCUCCAAAGAU-GUUAAAUGAUAGUGUA 5' |
-24.30 | 1 | KARR-seq |
| chrX:139865750:139865825:[+] | chr2:112973746:112973798:[-] | nonBSJ supported | 3UTR |
circRNA 5':UUCCAGUCAAUCAGUGUCUUCCAGAAAGAAAUCCAGGUCUUC--CAGU---CAAUCAGUGUCUUCCAGAAAGAAAUCCAGG 3' ||||:|||||||| |||| ||| ||:| | |||| :||| |||| target 3':UAGGUUAGUUAGUCUUC-----------------UCCA-AAGAUGUUAAAUGAUAGUGUAAAUGGGU---------GGUC 5' |
-30.50 | 2 | KARR-seq |
| chrX:139865750:139865807:[+] | chr2:112973746:112973784:[-] | nonBSJ supported | 3UTR |
circRNA 5':UUCCAGUCAAUCAGUGUCUUCCAGAAAGAAAUCCAGGUCUUCCAGUCAAUC-AGUGUCU 3' ||||:|||||||| |||| ||| |||| | |:|| target 3':UAGGUUAGUUAGUCUUC-----------------UCCA-AAGAU--GUUAAAUGAUAGU 5' |
-25.10 | 1 | KARR-seq |