Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866237:139866268:[+] chr2:71211517:71211552:[-] nonBSJ supported Intron

circRNA 5':AGUCCAC--GUCUUCCAAC-----AAAGCCAUGUCUUCC 3'


            |:||| | ||:|| |||| |||||:||


target  3': CGGGUCCCC-GAGGGAAUACCUUUUUCA--ACAGAGGGG 5'

 -19.80 1 KARR-seq
chrX:139866237:139866268:[+] chr2:71211515:71211552:[-] nonBSJ supported Intron

circRNA 5': AGUCCAC--GUCUUCCAAC-----AAAGCCAUGUCUUCC 3'


            ||:||| | ||:|| |||| |||||:||


target  3':GUCGGGUCCCC-GAGGGAAUACCUUUUUCA--ACAGAGGGG 5'

 -21.90 1 KARR-seq