Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865431:139865447:[+] chr2:62097588:62097603:[-] nonBSJ supported Intron

circRNA 5':AAUCCUGAGCUUCCAGA 3'


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target  3':GUAGGAA-CGAAGGUCA 5'

 -20.90 1 KARR-seq
chrX:139865431:139865462:[+] chr2:62097654:62097686:[-] nonBSJ supported Intron

circRNA 5':AAUCCUGAGCUUCCAGAAAAUCCACAU----CUUCC 3'


            ||||| :||||| |||| ||:|


target  3':GUAGGA--UGAAGGGAAA-UAGGGCCCUAAUGAGGA 5'

 -18.90 1 KARR-seq
chrX:139865431:139865462:[+] chr2:62097588:62097609:[-] nonBSJ supported Intron

circRNA 5':AAUCCUGAGCUUCCAGAAAAUCCACAUCUUCC 3'


            ||||| |||||||| ||||||


target  3':GUAGGAA-CGAAGGUC----------AGAAGGG 5'

 -25.50 1 KARR-seq