Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139866427:139866470:[+]	chr2:42425373:42425425:[+]	nonBSJ supported	Intron	circRNA 5':UUCCAACAAAGGUACGUCUUCCAACAAAGG-------------UACGUCUU--CCAACA 3' \|\|\|\| \|\|\| \|:\| \|\|\|\| \|\|\| :\|\|:\|\|\|: \|\|\|\|\| target 3':UAGGUGA---CCA-GUAAAAGGGAG--UCCUAUUUAUAUAUAAGUGUAGAGAUGGUUGG 5'	-27.50	1	KARR-seq
chrX:139866406:139866457:[+]	chr2:42425365:42425411:[+]	nonBSJ supported	Intron	circRNA 5':GUCUUCCAGCCUACUUGUGUCUUCCAACAAAGGUACGUCUU--CCAAC---AAAGGU 3' \|\|:: \|\|\| \|\| \|:\|:\| \|\|\| \|\|:\|\|\|: \|\|\|\|\| \|\|\|:\| target 3':AAGGGAGUCCUAUUUAUAUAUAAG----------UGUAGAGAUGGUUGGUUUUUUCU 5'	-20.60	1	KARR-seq