Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139866014:139866046:[+]	chr19:54490224:54490248:[+]	nonBSJ supported	3UTR	circRNA 5':CCAGAAAAUCCACGUCUUCCCAACAAUCCAAGU 3' \|\|\|\| \|\|\|\|\|\|\|\|\| \|\|\|\|\|\|\| target 3':AGUCUAA-------AGAAGGGUUCCUAGGUUC 5'	-25.60	1	KARR-seq
chrX:139866014:139866056:[+]	chr19:54490228:54490290:[+]	nonBSJ supported	3UTR	circRNA 5':CCAGAAAA-UCCACGU-CUUCCCAACA-AUCCAAG--------------UCUUCC---GGAUA 3' \|\|:\|\| \|\|\|\| \|: \|\|\|\|\|\|\| \|\| \|\|\| \|\|\|\|\|\| \|\|\|\| target 3':AGUUUUGGGAGGUUCGUGAAGGGUAGUCUAGAUCUUAUUUUAAGUCUAAAGAAGGGUUCCUAG 5'	-30.80	1	KARR-seq