Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866679:139866719:[+] chr19:36585007:36585062:[+] nonBSJ supported CDS

circRNA 5':UUCC-AGC-AUCUCU-----GUGUCUUCCAGCAUCU--------UCAUG-UCUUCCA 3'


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target  3':UAGGUUCGAUAGAAACCUACCACAGAA-GUCGUAGAGAAGACCGAGUGUGAGAAGGA 5'

 -39.50 3 KARR-seq