Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866114:139866136:[+] chr19:15375333:15375360:[-] nonBSJ supported CDS

circRNA 5':CACAUCUUCCA----AUGGC-CUCCAGG 3'


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target  3':UUGUAGAGGAACUCCUACGGCGACGUCG 5'

 -14.80 1 KARR-seq
chrX:139865497:139865515:[+] chr19:15427926:15427943:[-] nonBSJ supported Intron

circRNA 5':CCAAGAAGCUCCAAGU-CUU 3'


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target  3':UGUUCA-CGAGGUUCAUGA 5'

 -18.30 1 KARR-seq