Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139865494:139865516:[+]	chr19:7692580:7692617:[-]	nonBSJ supported	Intron	circRNA 5': CUUCCAAGA---------------AGCUCCAAGUCUUC 3' \|\|\|\|\| \|\| \|\|\|:\|\|\|\|::\|\|\| target 3':UGAAGGG-CUAAGUAGGGGAGCGGCUCGGGGUUUGGAAC 5'	-19.40	2	KARR-seq
chrX:139865505:139865571:[+]	chr19:7692577:7692642:[-]	nonBSJ supported	Intron	circRNA 5':CUCCAAGUCUUCCAGUAA-AUCAAGUCUU-CC-AGCAAAUCCAGUCUUCCAGCAAU--UACU--GGUCUUC-CAC 3' \|\|\|\| \|\|\|\|\| \|\|\| :\|\|: \|\| \|\|\| :\|\|\|: \|:\| \|\|\| :\|\| \|\|:\|:\|\| \|\| target 3': AGGU---GAAGGGCUAAGUAGG--GGAGCGGCUCG---GGGUUUGGAACACGUACUUGUGUUUCCGGGAGAGUA 5'	-35.20	2	KARR-seq