5'UTR
CDS
3'UTR
Exon
circRNA binding site
| CircRNA interaction region | Target interaction region | Interaction type | Target element | RNA duplex | MFE (kcal/mol) | Reads | Methods |
| chrX:139865947:139866008:[+] | chr18:33737391:33737437:[+] | nonBSJ supported | Intron |
circRNA 5':GAUCCACGUCUUCCAGAAAAUCCAUGUCUUCCAGAAAAU-CCAUGUCUUCCAGUAACCUCCCA 3' ||||| ||||| ||| ||||: |||:: |||||| target 3':AUAGGU-CAGAA-GUC-------------AGGUUGUCCAUGGUGUUAUCGAGACC-GGAGGGG 5' |
-32.60 | 2 | KARR-seq |
| chrX:139866035:139866098:[+] | chr18:33753756:33753803:[+] | nonBSJ supported | Intron |
circRNA 5':AACAAUCCAAGUCUUCCGGAUAAUUUGGGUCUUCCUGAAAAUCUACGUCUUCCAAAAAAGCCAU 3' ||||: :||||| |||||:: |||| |||| || | ||||| ||:||| target 3':AUGUUG----UAGAAGAUAU-UUAAAUU-----GGACGUUUA-AU-C-GAAGGG---UUUGGUU 5' |
-24.70 | 1 | KARR-seq |