Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139866357:139866416:[+]	chr18:24121339:24121413:[-]	nonBSJ supported	Intron	circRNA 5':CCAG-CAAAUC-CACGUCUUCCAACA-AAGCCAUGUCUUCCAUC--------------AAAUUAAUGUCUUCC--AGCC 3' \|\|\| \|\| \|\|\| \|\|\| \|\|: \|\|:\|\|\|:\| \|\|\|\|\| \|\|\| :\|\| \|\|\| target 3':CGUCUGUGAAAAGUGAAUGCUAUGACAUUC--UAUCGAGGGUGGAGACAAUAAAAACUUUUAAG-ACAAUGGGUUUCG 5'	-18.90	1	KARR-seq
chrX:139866350:139866396:[+]	chr18:24121362:24121410:[-]	nonBSJ supported	Intron	circRNA 5':GUGUCUUCCAGCAAAUCCACGUCUUCCAACAAAGCCAUGUCU----UCCAU 3' \|\|\| \|\|\| :\|\|\|\| \|\|\| \|\|\| :\|\|\| target 3':GACAUUCUAUCGA--GGGUGGAGACAAUAAAAACUUUUAAGACAAUGGGUU 5'	-16.90	1	KARR-seq