Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139865842:139865895:[+]	chr18:22902061:22902104:[-]	nonBSJ supported	5UTR	circRNA 5': UGUCUUCCAGAAAAAUCUACGUCUUCCACCAAAUCCAGGUCUUCCAGU-CAAUCC 3' \|\|\|\|\|\|\|\|\|: \|\|: \|\|\|\|\|\|\|\| \|\|:\|\|: \|\|\|\|\| target 3':AGCAGAAGGUUGAGG-AGGGGCAGAAGG----------CCGGAGAAGAAUGUUAG 5'	-39.80	2	KARR-seq
chrX:139865843:139865895:[+]	chr18:22902072:22902104:[-]	nonBSJ supported	5UTR	circRNA 5':GUCUUCCAGAAAAAUCUACGUCUUCCACCAAAUCCAGGUCUUCCAGU-CAAUCC 3' \|\|:\|\|\| \|\|\|\|\|\|\|\| \|\|:\|\|: \|\|\|\|\| target 3':GAGGAGGG----------GCAGAAGG----------CCGGAGAAGAAUGUUAG 5'	-26.80	3	KARR-seq