Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866035:139866073:[+] chr18:8639258:8639302:[+] nonBSJ supported 3UTR

circRNA 5':AACAAUCCAAGUCUUCCGGAUAAUUUGGGUCUU-----CC-UGAA 3'


            ||| |||||| | |::||| ||| || |||


target  3':CUGUGUGGUUCAAUAAGUUUAUGUAUUAAUGAAUUAAUGGAACUG 5'

 -16.20 2 KARR-seq
chrX:139866070:139866089:[+] chr18:8639312:8639339:[+] nonBSJ supported 3UTR

circRNA 5':UGAAAAUCUACGU--CUU------CCAA 3'


            |||| |:||: ||| |||


target  3':UCUUUCUGGUGUUACGAAAAGUAUGGUG 5'

 -7.80 2 KARR-seq