5'UTR
CDS
3'UTR
Exon
circRNA binding site
| CircRNA interaction region | Target interaction region | Interaction type | Target element | RNA duplex | MFE (kcal/mol) | Reads | Methods |
| chrX:139865832:139865850:[+] | chr17:65899903:65899920:[+] | nonBSJ supported | CDS |
circRNA 5':AGUCAGUCAGUGUCUUCCA 3' |||| :| |||| || target 3':ACAGUAGGCCACAUU-GGA 5' |
-11.50 | 1 | KARR-seq |
| chrX:139865418:139865460:[+] | chr17:65906991:65907045:[+] | nonBSJ supported | CDS |
circRNA 5':AGG-UCUUCC--------------------AGAUAAUCCU-GAGCUUCCAGAAAAUCCACAUCUU 3' || |||||| ||| ||| |||||:| ||||||| target 3':ACCAAGAAGGAACGUCCCAAAUAGUGACAGUCU--UAGAUUCUCGAGGAA-------GUGUAGA 5' |
-24.70 | 1 | KARR-seq |
| chrX:139865811:139865844:[+] | chr17:65899919:65899951:[+] | nonBSJ supported | CDS |
circRNA 5':AGAAAGAAAUCCAGGUCUUC-CAGUCAGUCAGUGU 3' || ||| ||||| | |||:| :|| target 3':ACUGAAAG-AGGAAAAGAAGAGAAAGUUAACUAC 5' |
-15.00 | 1 | KARR-seq |