Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139865556:139865618:[+]	chr17:63798702:63798767:[-]	nonBSJ supported	Intron	circRNA 5':AUUACUGGU---CUUCCAC-CAAAUC---CAGA--UCUUCCAGGAAAAUCCACGUCUUCCAGGAAAUC-CAUG 3' \|:\|\|\|:: \|:\|\|\| \|\|\|\|\|\| \|\|: \|\|: \|\|\|:\| \|\|\| :\|\|\|\| \|\|\| \|\|\| target 3':AAGUGAUUUUGUGGAGGAUAGUUUAGAAUGUUGUAAGGUGGUUCGAGUAGUAAUAGAA-------UAGUGUAA 5'	-28.60	2	KARR-seq
chrX:139865522:139865539:[+]	chr17:63798749:63798766:[-]	nonBSJ supported	Intron	circRNA 5':AAUCAA-GUCUUCCAGCAA 3' \|\|\|\| :\|\|\|\| :\|\| target 3': UAGUAAUAGAAUAGUGUA 5'	-6.90	1	KARR-seq
chrX:139865523:139865539:[+]	chr17:63798750:63798766:[-]	nonBSJ supported	Intron	circRNA 5':AUCAA-GUCUUCCAGCAA 3' \|\|\| :\|\|\|\| :\|\| target 3': AGUAAUAGAAUAGUGUA 5'	-5.80	1	KARR-seq