Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865377:139865424:[+] chr17:42435423:42435483:[-] nonBSJ supported Intron

circRNA 5':CUCC-------GGGUCUUCCAGC-GACUUCA--AGUCU-UC-CAAUAAUCUCA----AGGUCUU 3'


            ||| ||| ||| |||| ||: || || |||| |||:|:


target  3':UAGGUUUAUCUCCCUAC--GUCUCCUGAUCCCCUCGACCAGAGUGAGUCGAGUCCCCUCCGGG 5'

 -20.60 2 KARR-seq