Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139866755:139866816:[+]	chr17:42266096:42266161:[+]	nonBSJ supported	Intron	circRNA 5': CCAUGUCU-----UCCAACGUCUCC---AGUGUGCUGAUCUUCUGACAUUCAGGUCUUCCAGUGU--CUGCA 3' \|\| \| \|\|\| \|\|\|\|\|\| \|\|:\| \|\|\|\|\|\| \|\|\|\| \| \|:\|:\|: \|\|\|: \| \|\|\|\| target 3':AGG-AGAGAGUUUGAGGUUGAAGGGUUACUCACAC--CUAGUCGUCCUU---UUCGGGU-GUCGGAACGACGA 5'	-38.60	2	KARR-seq

Variants map to interaction

Interaction region	CircRNA/target	Mutation ID	Position	Variant	Associated trait	Resource
chrX:139866755:139866816:[+]	circRNA	-	chrX:139866793-139866794	C>T	LICA-CN	ICGC