Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866680:139866701:[+] chr17:40928318:40928339:[+] nonBSJ supported CDS

circRNA 5':UCCAGCAU-CUCUGUGUCUUCCA 3'


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target  3': GGGAGUAGGAGACACAGAAGGG 5'

 -29.50 1 KARR-seq
chrX:139866684:139866701:[+] chr17:40928318:40928336:[+] nonBSJ supported CDS

circRNA 5':GCAU-CUCUGUGUCUUCCA 3'


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target  3':AGUAGGAGACACAGAAGGG 5'

 -26.70 1 KARR-seq