Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866581:139866602:[+] chr17:27754099:27754119:[+] nonBSJ supported Intron

circRNA 5':GCUACGUCUUCCAACAAAUCCA 3'


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target  3': GGUACAGACGGAUGUUUAGGA 5'

 -20.00 2 KARR-seq
Variants map to interaction
Interaction region CircRNA/target Mutation ID Position Variant Associated trait Resource
chrX:139866581:139866602:[+] circRNA - chrX:139866592-139866593 C>A LICA-CN ICGC