Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866543:139866558:[+] chr17:1257508:1257530:[-] nonBSJ supported CDS

circRNA 5':AAUCCAC---GUCU----UCCAG 3'


            |:|| |||| ||||


target  3':GUGGGACGUACAGACUUCAGGUA 5'

 -9.00 2 KARR-seq
chrX:139866653:139866684:[+] chr17:1302912:1302955:[-] nonBSJ supported Exon

circRNA 5':UGCUCGUCUUCCAACA-------------UCUCCACGUC-UUCCAG 3'


            |||| |||:||| ||:|| |||| ::|||


target  3':GCGAG-AGAGGGUACACCGCCCACGACGAAGGGG-GCAGUGGGGUG 5'

 -30.50 2 KARR-seq