Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866202:139866218:[+] chr16:72686712:72686736:[-] nonBSJ supported Intron

circRNA 5': AUCCGGGUCUUC--------CAGGA 3'


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target  3':UUAGGA-CGGGAGACAUACAAGUCCA 5'

 -14.20 5 KARR-seq
chrX:139866203:139866218:[+] chr16:72686715:72686736:[-] nonBSJ supported Intron

circRNA 5':UCCGGGUCUUC--------CAGGA 3'


            || |:|:|| ||||


target  3': GGA-CGGGAGACAUACAAGUCCA 5'

 -11.20 2 KARR-seq