Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139865492:139865555:[+]	chr16:19720798:19720862:[-]	nonBSJ supported	Intron	circRNA 5': GUCUUCCAAGAAGCUC---CAA-GUCUUCCAGUAAAUCAAGUCUU--CCAGCAAAUCCAGUCUUCCAGCA 3' \|\|\|\|\|\|\| \|\|: \|\|\| \|:\|:\|\|\|\|\|: \|\|\|\| : \|\|\| \|\|\|\| :\|\|\|\| \|\|\|\|\| target 3':CCAGAAGGGCGAACGGCUCAGUUACGGGAGGUCGGUUAGGGU-GAAUCGGUCUA--GGGUCC---GGUCGA 5'	-52.10	1	KARR-seq
chrX:139865492:139865526:[+]	chr16:19720798:19720837:[-]	nonBSJ supported	Intron	circRNA 5': GUCUUCCAAGAAGCUC---CAA-GUCUUCCAGUAAAUCA 3' \|\|\|\|\|\|\| \|\|: \|\|\| \|:\|:\|\|\|\|\|: \|\|\|\| target 3':CCAGAAGGGCGAACGGCUCAGUUACGGGAGGUCGGUUAGG 5'	-33.60	1	KARR-seq