Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866620:139866652:[+] chr15:100814759:100814790:[-] nonBSJ supported Intron

circRNA 5':AGGUCUUCCAGCA--UCUCCA--GGGCUUCCAGCAUC 3'


            |:||| ||| |||| :|:|: ||||


target  3':ACUAGAU-GUCAUUCAGAGAAUAUCUGG----CGUAU 5'

 -16.60 2 KARR-seq
chrX:139866640:139866696:[+] chr15:100814706:100814759:[-] nonBSJ supported Intron

circRNA 5':GGCUUCCAGCAUCUGCUCGUCUUCCAACAUCUCCACGUCUUCCAGCAUCUCUGUGUC 3'


            || ||||| |||| |||: |: ||| ||:| |||||||||


target  3':AUGUUAAUCGUACCUUAA-AGAAAAAGAUAGGAAAGU-GAAAGUUG--GAGACACAGA 5'

 -27.80 2 KARR-seq