5'UTR
CDS
3'UTR
Exon
circRNA binding site
| CircRNA interaction region | Target interaction region | Interaction type | Target element | RNA duplex | MFE (kcal/mol) | Reads | Methods |
| chrX:139866419:139866445:[+] | chr15:100264362:100264397:[-] | nonBSJ supported | Intron |
circRNA 5':CUUGUGUCUUCCAACAA-------AGGUAC--GUCU 3' |::| ||:|||| || :|| ||| target 3':CAGUAGAGGAGGUCUACAAAAUAAUCGGUGAACAGU 5' |
-14.50 | 1 | KARR-seq |
| chrX:139866368:139866424:[+] | chr15:100264348:100264396:[-] | nonBSJ supported | Intron |
circRNA 5':ACGUCUUCCAACAAAGCCAUGUCUUCCAUCAAAUUAAUGUCUUCC-AGCCUACUUGUG 3' || || ||| ||:|||| |||| |||| |||||| target 3':AGCUGAUUCCUUUACA-GUAGAGGAGGUC-------UACAAAAUAAUCGG-UGAACAG 5' |
-26.20 | 1 | KARR-seq |