Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139865799:139865850:[+]	chr15:71171308:71171346:[+]	nonBSJ supported	Intron	circRNA 5':UCAGUGUCUUCCAGAAAGAAAUCCAGGUCUUCCAGUCAGUCAGUGUCUUCCA 3' \|\|: \|\|\|\|\|\|\|: \|\|\|\|\| \|\|\| \|\| \|\| \|\|\|\|\| target 3':UGUUCGAGAAGGUUC-UCUUU---UCCUGAUCUCUUGU--------GAAGG 5'	-23.40	2	KARR-seq
chrX:139865799:139865866:[+]	chr15:71171302:71171346:[+]	nonBSJ supported	Intron	circRNA 5':UCAGUGUCUUCCAGAAAGAAAUCCAGGUCUUCCAGUCAGUCAGUGUCUUCCAGAAAAAUCUACGUCUU 3' \|\|: \|\|\|\|\|\|\|: \|\|\|\|\| \|\|\| \|\| \|\| \|\|\|\|\| \|:\|\|\|: target 3':UGUUCGAGAAGGUUC-UCUUU---UCCUGAUCUCUUGU--------GAAGG-----------GUAGAG 5'	-24.80	2	KARR-seq
chrX:139865822:139865861:[+]	chr15:71171319:71171362:[+]	nonBSJ supported	Intron	circRNA 5':CAGGUCUUCCAGUCAGU--CAGUGUCUUCC---AGAAAAAU-CUAC 3' \|\|: \|\|\|:\|\| \|\|: \|\|\|\|\|\| \|\|\|\|\|\| \|\|\| target 3': UCUUAU-GGUUAGAAUAUGUUCGAGAAGGUUCUCUUUUCCUGAUC 5'	-20.60	1	KARR-seq