Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865580:139865618:[+] chr15:32099012:32099065:[-] nonBSJ supported Intron

circRNA 5':GAUCUUCCAGGAAAA----UCCA-CGUCU----------UCCAGGAAAUCCAUG 3'


            ||||: ||||||| || ||||: || || |||||:


target  3':AUAGAGUGUCCUUUCCAUAAGACGGCAGGCACGAGACGGAGACCCCGUAGGUGA 5'

 -26.40 1 KARR-seq
chrX:139865580:139865654:[+] chr15:32099012:32099073:[-] nonBSJ supported Intron

circRNA 5':GAUCUUCCAGGAAAAUCCACGUCUUCCAGGAAAUCCAUG-UCUUCCAAUAAUUUCAAGGUCUUCCAUCAAAUACAG 3'


            ||||: ||||||| ||| || | ||| || ||| || || || | ||||: |||


target  3':AUAGAGUGUCCUUUCCAUA--AGACGG-C----AGGCACGAGACGG-------AGACCCCGUAGGUGAUACCUGUA 5'

 -30.20 1 KARR-seq