Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866453:139866487:[+] chr14:75158800:75158837:[-] nonBSJ supported 5UTR

circRNA 5':AAGGU-ACGUCUU-CCAACAAAGGUAUGUCUUCCAAC 3'


            |||| || || : : |||||||||||


target  3':GUCCAUUGAAAACCGGGGAAAGUGGAACAGAAGGUUGA 5'

 -22.90 1 KARR-seq
chrX:139866446:139866487:[+] chr14:75158793:75158837:[-] nonBSJ supported 5UTR

circRNA 5':UCCAACAAAGGU-ACGUCUU-CCAACAAAGGUAUGUCUUCCAAC 3'


            |||| |||| || || : : |||||||||||


target  3':UGGUUUCGUCCAUUGAAAACCGGGGAAAGUGGAACAGAAGGUUGA 5'

 -26.90 1 KARR-seq