Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139865957:139866017:[+]	chr14:24778928:24778996:[+]	nonBSJ supported	5UTR	circRNA 5':UUCCAGAAAA-UCCAUGUCUUCCAGAAAA--UCCAUGUCUU-CCAGUAA-CCU--CCCAGUC-UUCCAG 3' \|\|\| \| :\|\| \|\| \|:\|\|\| :\|\|\|: \|\|\|\| \|\| \|\|\| \|\|\|\|\|\|\| :\|\|\|\| target 3':CAGGCCGACUCGGGGACCGGAGGAUGGAGGAGGGUGGAGAACGGAGUCCGGGACGGGGUCAGUGAGGUG 5'	-45.80	1	KARR-seq
chrX:139865950:139866008:[+]	chr14:24778911:24778963:[+]	nonBSJ supported	5UTR	circRNA 5':CCACGUCUU-CCAGAAAAUCCAUGUCUUCCAGAAAAUCCAUGUCUUCCAGUAACCUC-CCA 3' \|\|\| \|\|\|\| \|\| :\|\| \|\|:\| \|\|\|\| \|\|\|\|: \|:\| \|\|\| \|\|\| \|\| target 3': GUGGAGAACGGAGUCC-GGG-ACGG--GGUCAGUGAGGUG--GGA-GUCCCGAGAGUGGC 5'	-35.10	1	KARR-seq