Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139866482:139866553:[+]	chr14:21859707:21859766:[-]	nonBSJ supported	CDS	circRNA 5':UCCAACAAAGGUACGUCUUCCAGAAAAUCCACGUCU-UCCAACCAAGCCAUGUCUUCCAGAAAAUCCACGUCU 3' \|\|\| \|\|\|\|\| \|:\|\|: \|\| \|\|: \|\|\| \|\|\| \|\|\|\|\| \|\|\|\|\|:\|\| target 3':UGGUCGUUUCAUGGUAGGUGGAAUAACUACUGUCCCUAGGCC---------CAG-AGGUCC---AGGUGUAGU 5'	-37.60	1	KARR-seq
chrX:139866507:139866553:[+]	chr14:21859720:21859766:[-]	nonBSJ supported	CDS	circRNA 5':AAUCCACGUCUUCCAACCAAG----CCAUGUCUUCCAGAAAAUCCACGUCU 3' \|\|\|\|\|\| \|\| \|\| \|\|\| \|\|\|\|\| \|\|\|\|\|:\|\| target 3':GUAGGUGGAAUAACUACUGUCCCUAGGCCCAG-AGGUCC---AGGUGUAGU 5'	-30.20	1	KARR-seq