5'UTR
CDS
3'UTR
Exon
circRNA binding site
| CircRNA interaction region | Target interaction region | Interaction type | Target element | RNA duplex | MFE (kcal/mol) | Reads | Methods |
| chrX:139865438:139865495:[+] | chr14:21727828:21727876:[-] | nonBSJ supported | Intron |
circRNA 5':AGCUUCCAGAAAAUC-CACAUCUUCCAGACAAUCCAUGUCUUCCGGACAAUCCAUGUCU 3' ||:||| |||| | ||||: || ||| |:| | ||| ||| ||| target 3': UGGAGGA---UUAGAGAUUAGAGUAUC------GUAAUGGAAACAGGUUCGGUCCAGC 5' |
-24.30 | 5 | KARR-seq |
| chrX:139865466:139865495:[+] | chr14:21727841:21727876:[-] | nonBSJ supported | Intron |
circRNA 5':CAAUC-CAU-GUCUU-CC---GGACAAUCCAUGUCU 3' |||| ||| |: || || | ||| ||| ||| target 3':AUUAGAGUAUCGUAAUGGAAACAGGUUCGGUCCAGC 5' |
-16.40 | 1 | KARR-seq |
| chrX:139865432:139865498:[+] | chr14:21727835:21727905:[-] | nonBSJ supported | Intron |
circRNA 5': AUC-CUGAGCUUCCAGAAAAUCCACAUCUUCCAGACAAUCCAUGUC--------UUCC-GGACAAUCCAUGUCUUCC 3' ||| ||:| ||: || || ||||: ||| ||| ||| ||| ||:|||:| target 3':UUAGAGAUUAGAGUAUCGUAAUGGAAAC--AGGUUC----GGUCCAGCAAUAAGAAAGAACCUAAAAU-UAUAGAGGA 5' |
-23.00 | 1 | KARR-seq |
| chrX:139865433:139865498:[+] | chr14:21727836:21727905:[-] | nonBSJ supported | Intron |
circRNA 5': UC-CUGAGCUUCCAGAAAAUCCACAUCUUCCAGACAAUCCAUGUC--------UUCC-GGACAAUCCAUGUCUUCC 3' || ||:| ||: || || ||||: ||| ||| ||| ||| ||:|||:| target 3':UAGAGAUUAGAGUAUCGUAAUGGAAAC--AGGUUC----GGUCCAGCAAUAAGAAAGAACCUAAAAU-UAUAGAGGA 5' |
-22.40 | 1 | KARR-seq |