Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865686:139865707:[+] chr13:46542030:46542050:[-] nonBSJ supported CDS

circRNA 5':AUCUGUGUCUUCCACCAAAUCC 3'


            ||| |||| || |||


target  3':GAGAGACAGCACAA-GUAUAGC 5'

 -9.70 4 KARR-seq
chrX:139865827:139865844:[+] chr13:46585636:46585655:[-] nonBSJ supported CDS

circRNA 5':CUUCCAGU--CAGUCAGUGU 3'


            |||||:| ||:| :||


target  3':AAAGGUUACUGUUAAGUACU 5'

 -11.10 2 KARR-seq