Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139865418:139865438:[+]	chr12:110368722:110368748:[-]	nonBSJ supported	3UTR	circRNA 5': AGGUCUUC--C-AGAUA--AUCCUGA 3' \|\|\|:\|::\| \| \|\|\| \|\|\|\|:\| target 3':CUCCGGGGGAAGAUCUUCCGUAGGGCC 5'	-17.80	3	KARR-seq
chrX:139865418:139865447:[+]	chr12:110368722:110368759:[-]	nonBSJ supported	3UTR	circRNA 5': AGGUCUUC--C-AGAUA--AUCCU--GAGCUUCCAGA 3' \|\|\|:\|::\| \| \|\|\| \|\|\|\|: \|\|\|\| \|\|\|\|: target 3':CUCCGGGGGAAGAUCUUCCGUAGGGCCCUCGUAGGUUG 5'	-27.40	1	KARR-seq