Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139865400:139865429:[+]	chr12:48202219:48202242:[-]	nonBSJ supported	Intron	circRNA 5':AGUCUUCCAAUAAUCUCAAGGUCUUCCAGA 3' \|\|\|::\|\|\| :\|:\| \|\|:\|\| :\|\|\|\| target 3':ACAGGGGGU----GGGG-UCUAG-GGGUCG 5'	-26.30	1	KARR-seq
chrX:139865411:139865429:[+]	chr12:48202227:48202242:[-]	nonBSJ supported	Intron	circRNA 5':AAUCUCAAGGUCUUCCAGA 3' \|:\|:\| \|\|:\|\| :\|\|\|\| target 3': UGGGG-UCUAG-GGGUCG 5'	-16.50	1	KARR-seq