Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139865987:139866004:[+]	chr12:46384650:46384667:[-]	nonBSJ supported	Intron	circRNA 5':CAUGU-CUUCCAGUAACCU 3' \|:\|\| \|\|\|\|\|\|\|: \|\|\| target 3':UUGCAGGAAGGUCG-UGGC 5'	-19.10	1	KARR-seq
chrX:139865667:139865690:[+]	chr12:46355626:46355643:[-]	nonBSJ supported	CDS	circRNA 5':AUCCAUG-UCUUCCAGAAAAAUCUG 3' \|\|\| \|\|\|\|\| \|:\|\|\| target 3':GAGGCAAAAGAAG-------UGGAC 5'	-9.10	1	KARR-seq

Variants map to interaction

Interaction region	CircRNA/target	Mutation ID	Position	Variant	Associated trait	Resource
chr12:46355626:46355643:[-]	target	-	chr12:46355629-46355630	C>T	LICA-CN	ICGC