Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139865878:139865907:[+]	chr12:6875863:6875902:[+]	nonBSJ supported	CDS	circRNA 5':AGGU-----CUUCCA-GUCAA--UCC-ACAUCUU-CCGGA 3' \|\|: \|:\|\|\|\| \|: \|\|\| \|\|\|\| \|\|\|\| target 3':GCCGGCGACGGAGGUGCGAAAAGAGGCUGUACCACGGCCC 5'	-22.50	2	KARR-seq

Variants map to interaction

Interaction region	CircRNA/target	Mutation ID	Position	Variant	Associated trait	Resource
chrX:139865878:139865907:[+]	circRNA	-	chrX:139865903-139865904	C>T	LINC-JP	ICGC