Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866548:139866570:[+] chr11:134074251:134074271:[-] nonBSJ supported Intron

circRNA 5':ACGUCU-UCCAGAAAAUAUAUGUC 3'


            |:||| ||||||||| |||:


target  3':GGUAGAGAGGUCUUUU---UACGU 5'

 -18.40 2 KARR-seq
chrX:139866526:139866552:[+] chr11:134074250:134074275:[-] nonBSJ supported Intron

circRNA 5':AGCCAUGUCUUCCAGAAAAUC-CACGUC 3'


            ||||| || ||||||||| |||:|


target  3': UGGUAGAG-AGGUCUUUUUACGUGUAU 5'

 -25.20 2 KARR-seq