Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139866414:139866458:[+]	chr11:102948912:102948953:[-]	nonBSJ supported	Intron	circRNA 5':GCCUACUUG-UGUCUUCCAACAAAGGUAC-GUCUUCCAACAAAGGUA 3' \|\|\| \|:\|\| \|:\|\|\|\| \|\|\|:\|\| \|\|\|\|\|\|\| target 3': GGAAAAGUAAUAGUAUUAG---UUCAUGCCAGGAGAA-GUUUCCAG 5'	-24.90	2	KARR-seq
chrX:139866414:139866458:[+]	chr11:102948911:102948953:[-]	nonBSJ supported	Intron	circRNA 5':GCCUACUUG-UGUCUUCCAACAAAGGUAC-GUCUUCCAACAAAGGUA 3' \|\|\| \|:\|\| \|:\|\|\|\| \|\|\|:\|\| \|\|\|\|\|\|\| target 3':AGGAAAAGUAAUAGUAUUAG---UUCAUGCCAGGAGAA-GUUUCCAG 5'	-26.00	1	KARR-seq