Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139865588:139865653:[+]	chr10:119059583:119059633:[-]	nonBSJ supported	Intron	circRNA 5':AGGAAAAUCCACGUCUUCCAGGAAAUCCAUGUCUUCCAAUAAUUUCAAGGUCUUCCAUCAAAUACA 3' \| \|\|\|\|\| \|\|::\|\|\| \|:\|\| \| \|\|:\|\|\| \|:\| \|\|\|\|\|\|: \|\|\| \|\|\| target 3':ACAGUUUAGUUGUGGAAA------UGGG-AGAGGAGG------AGG-UCCAGAGAAAAGUC-AUGG 5'	-30.40	3	KARR-seq
chrX:139865621:139865666:[+]	chr10:119059422:119059473:[-]	nonBSJ supported	Intron	circRNA 5':UUCCAAUAAU-UUCAAGGUCUUC--CAUCAAAUA-CA--GAUCUUCCAGCUA 3' \|\|\| \|\|\|\|\| \|\| \|\|: \|\| \|\|\|\|\|\| \|\|: target 3':UAGGACAAAAUAAGUUAAUGAUAACGUGAACACACGUCACUAGAACAACGGA 5'	-12.80	3	KARR-seq