5'UTR
CDS
3'UTR
Exon
circRNA binding site
| CircRNA interaction region | Target interaction region | Interaction type | Target element | RNA duplex | MFE (kcal/mol) | Reads | Methods |
| chrX:139865803:139865824:[+] | chr10:88649365:88649386:[+] | nonBSJ supported | Intron |
circRNA 5':UGUCUU-CCAGAAAGAAAUCCAG 3' |:||: || |||| ||| target 3':UCGGAGCGGGACC-CUUUUGGUG 5' |
-12.40 | 2 | KARR-seq |
| chrX:139865772:139865806:[+] | chr10:88646404:88646440:[+] | nonBSJ supported | Intron |
circRNA 5': AGAAAGAAAUC---CAGGUCUUCCAGUCAAUCAGUGUC 3' | ||||||| |||| ||:| || |||: target 3':AUGUUUCUUUUCAUUGUCCUUUC--UCGGAGAGACACGA 5' |
-18.50 | 2 | KARR-seq |
| chrX:139865832:139865867:[+] | chr10:88646476:88646506:[+] | nonBSJ supported | Intron |
circRNA 5':AGUCAGUCAGUGUCUUCCAGAAAAAUCUACGUCUUC 3' ||||: |||: ||||:|||| target 3': CAGUUU-UCAUUACUUUAGAUUC--GAUGUAGAA 5' |
-14.30 | 2 | KARR-seq |