Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139865749:139865802:[+]	chr10:77735044:77735087:[+]	nonBSJ supported	Intron	circRNA 5':CUUCCAGUCAAUCAGUGUCUUCCAGAAAGAAAUCC--AGGUCUUCCAGU-CAAUCAG 3' \|\|\|\|\| \|\|:\| \|\|\|\|\|\|:\|\|\|\|\| \|:\|\|\|:\| \|\|\|:\|\| target 3': AAGGU-----------AGGAAGUCUUUUUUUAGUCCUUCAGGACCCUUUGUUGGU 5'	-29.70	1	KARR-seq
chrX:139865805:139865832:[+]	chr10:77735056:77735083:[+]	nonBSJ supported	Intron	circRNA 5': UCUUCCAGAAAGAAAUCCAGGUCUUCCA 3' \|\|:\| \|\|\|\|\|\|:\|\|\|\| \|\|\|\| \|\|\| target 3':UAGGAAGUCUUUUUUUA-GUCCUUCAGGA 5'	-24.30	1	KARR-seq