Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139865839:139865882:[+]	chr10:31643386:31643429:[+]	nonBSJ supported	Intron	circRNA 5':CAGUGUCUUCC--AGAAAAA-UCUACGUCUUCCACCAAAUCCAGGUC 3' \|\| :\| \|\|\| \|\|\|\|\|\|\| \|\|\| \| \|\|:\|\|\| \|\|\|\| \|:\|\| target 3': UCUUAUUAGGAAUCUUUUUAAGA-GGAGGAGGGGGUUCUU-UUCAC 5'	-26.90	2	KARR-seq
chrX:139865939:139865967:[+]	chr10:31643388:31643423:[+]	nonBSJ supported	Intron	circRNA 5':UUCCU--GAAGA----UCCACGUCUUCC-AGAAAAU 3' \|\|\|\| \|\|\|:\| \|\|\| \| \|\|::\|\| \|\|\|\|\|\| target 3':UAGGAAUCUUUUUAAGAGGAGGAGGGGGUUCUUUUC 5'	-23.10	2	KARR-seq