5'UTR
CDS
3'UTR
Exon
circRNA binding site
| CircRNA interaction region | Target interaction region | Interaction type | Target element | RNA duplex | MFE (kcal/mol) | Reads | Methods |
| chrX:139865673:139865753:[+] | chr1:223063875:223063927:[+] | nonBSJ supported | Intron |
circRNA 5':GUCUUCCAGAAAAAUCUGUGUCUUCCACCAAAUCCAAGUCUUCCAGUAAAUCUAGUUCUUCCA----GAAAAAUCUAG-AUCUUCC 3' |||||||||| ||||||| || :|||::||| ||| |||: ||||:|| target 3':AAGAAGGUCUU--------CAGAAGG-GGC------------------------UAAGGGGGUUUUACUUGAUAGGGAAUAGAGGG 5' |
-44.00 | 2 | KARR-seq |