Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139866329:139866360:[+]	chr1:220977746:220977786:[+]	nonBSJ supported	Intron	circRNA 5':UCC-AGGUCUUCCAGGAAAUCC-GU-----------GUCUUCCAG 3' \|\| \|\|\|:\|:\|\|\|\| \|\|\|\| \|: \|:\| \|\|\|\| target 3':UGGUUCCGGGAGGU----UAGGUCGUCGGUUCUAUCCGGUAGGUA 5'	-27.20	1	KARR-seq
chrX:139866329:139866381:[+]	chr1:220977742:220977786:[+]	nonBSJ supported	Intron	circRNA 5':UCC-AGGUCUUCCAGGAAAUCCGUGUCUUCCAGCAAAUCCAC-----GUCUUCCA-ACAA 3' \|\| \|\|\|:\|:\|\|\|\|: \|\|\|\|\|\|\| \|\|\| \|:\| \|\|\|\| \|\|\| target 3':UGGUUCCGGGAGGUU-------------AGGUCGUC--GGUUCUAUCCGGUAGGUAUGUA 5'	-37.20	1	KARR-seq