5'UTR
CDS
3'UTR
Exon
circRNA binding site
| CircRNA interaction region | Target interaction region | Interaction type | Target element | RNA duplex | MFE (kcal/mol) | Reads | Methods |
| chrX:139865766:139865791:[+] | chr1:211939552:211939575:[-] | nonBSJ supported | Intron |
circRNA 5':UCUUCCAGAAAGAAAUC-CAGGUCUUC 3' ||:|| || ||| |||| target 3':CGAGGGAACCA----AGAGUCAGGAAGU 5' |
-10.90 | 1 | KARR-seq |
| chrX:139865771:139865791:[+] | chr1:211939535:211939556:[-] | nonBSJ supported | Intron |
circRNA 5':CAGAAAGA--AAUCCAGGUCUUC 3' |||| ||: || ||:| target 3':AUCUUGACUGUUGCAACC-GAGG 5' |
-5.90 | 1 | KARR-seq |
| chrX:139866618:139866646:[+] | chr1:211997184:211997215:[-] | nonBSJ supported | Intron |
circRNA 5':CCAGGUCUUCCAGCAUC----UCCAGGGCUUCC 3' |||| || ||||||: ||| target 3':CGUCCUCUUAG-CGAAAACUCAGGUCCUCAAGU 5' |
-17.00 | 1 | KARR-seq |